Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs34984752 chr7:134024914 C/T 7.61E-5 255 32.35 31.27 21 KM Plot
SARC rs35008320 chr3:39154864 C/T 6.77E-5 257 30.75 35.77 12.17 KM Plot
SARC rs35076015 chr3:53026366 C/T 1.67E-14 257 30.93 35.37 1.17 KM Plot
SARC rs35163227 chr3:53127876 A/G 0 257 32.3 29.53 2.13 KM Plot
SARC rs35174175 chr3:53041509 T/C 1.67E-14 257 30.93 35.37 1.17 KM Plot
SARC rs35230793 chr3:52897236 G/A 1.98E-14 255 31.78 32.87 3.1 KM Plot
SARC rs35257455 chr1:182435258 GA/G 1.54E-8 250 30.85 35.13 6.72 KM Plot
SARC rs35290398 chr7:134011773 C/T 8.7E-5 248 35.37 27.95 25.57 KM Plot
SARC rs35378159 chr3:52992992 G/A 1.95E-14 254 30.93 34.57 1.17 KM Plot
SARC rs35384050 chr3:53008769 G/T 1.93E-14 256 30.85 35.37 1.17 KM Plot
SARC rs35385050 chr3:52997945 C/A 2.09E-14 254 30.85 35.37 1.17 KM Plot
SARC rs35507120 chr3:53053924 C/T 1.87E-14 256 31.1 35.37 1.17 KM Plot
SARC rs35515032 chr1:182430448 G/GTAA 1.27E-7 253 30.93 36.73 6.72 KM Plot
SARC rs35576914 chr3:53092270 G/A 0 257 32.3 32.87 2.13 KM Plot
SARC rs35596635 chr3:53004730 A/AT 1.93E-14 256 30.85 35.37 1.17 KM Plot